2019-08-06 11:11:25,440 : DEBUG : ModalContext : : ListFilesNodeFactory : LiverWorkflow : 2 : Factory is already initialized. Nothing to do. 2019-08-06 11:11:25,460 : DEBUG : ModalContext : : TileIteratorLoopStartNodeFactory : LiverWorkflow : 2 : Factory is already initialized. Nothing to do. 2019-08-06 11:11:25,464 : DEBUG : ModalContext : : ImgFeatureSetNodeFactory : LiverWorkflow : 2 : Factory is already initialized. Nothing to do. 2019-08-06 11:11:25,467 : DEBUG : ModalContext : : Joiner2NodeFactory : LiverWorkflow : 2 : Factory is already initialized. Nothing to do. 2019-08-06 11:11:25,469 : DEBUG : ModalContext : : RowFilterNodeFactory : LiverWorkflow : 2 : Factory is already initialized. Nothing to do. 2019-08-06 11:11:25,470 : DEBUG : ModalContext : : ImageColumnWriterNodeFactory : LiverWorkflow : 2 : Factory is already initialized. Nothing to do. 2019-08-06 11:11:25,472 : DEBUG : ModalContext : : LoopEndNodeFactory : LiverWorkflow : 2 : Factory is already initialized. Nothing to do. 2019-08-06 11:11:25,473 : DEBUG : ModalContext : : LoopEndNodeFactory : LiverWorkflow : 2 : Factory is already initialized. Nothing to do. 2019-08-06 11:11:25,474 : DEBUG : ModalContext : : LoopStartChunkNodeFactory : LiverWorkflow : 2 : Factory is already initialized. Nothing to do. 2019-08-06 11:11:25,475 : DEBUG : ModalContext : : ImgReaderTableNodeFactory : LiverWorkflow : 2 : Factory is already initialized. Nothing to do. 2019-08-06 11:11:25,476 : DEBUG : ModalContext : : ImgReader2NodeFactory : LiverWorkflow : 2 : Factory is already initialized. Nothing to do. 2019-08-06 11:11:25,484 : DEBUG : ModalContext : : Node : Tile Loop Start : 2:4 : Configure succeeded. (Tile Loop Start) 2019-08-06 11:11:25,484 : DEBUG : ModalContext : : Node : Image Features : 2:5 : Configure succeeded. (Image Features) 2019-08-06 11:11:25,485 : WARN : ModalContext : : Node : Joiner : 2:6 : Please define at least one joining column pair. 2019-08-06 11:11:42,959 : DEBUG : main : : Workflow : Image Reader (Table) : 2:16 : Triggering graph analysis on 2 2019-08-06 11:11:42,960 : DEBUG : main : : Node : Chunk Loop Start : 2:15 : reset 2019-08-06 11:11:42,960 : DEBUG : main : : Node : Chunk Loop Start : 2:15 : clean output ports. 2019-08-06 11:11:42,960 : DEBUG : main : : NodeContainer : Image Reader (Table) : 2:16 : Setting dirty flag on Chunk Loop Start 2:15 2019-08-06 11:11:42,960 : DEBUG : main : : NodeContainer : Image Reader (Table) : 2:16 : Setting dirty flag on LiverWorkflow 2 2019-08-06 11:11:42,961 : DEBUG : main : : NodeContainer : Image Reader (Table) : 2:16 : Chunk Loop Start 2:15 has new state: IDLE 2019-08-06 11:11:42,961 : DEBUG : main : : Node : Chunk Loop Start : 2:15 : Configure succeeded. (Chunk Loop Start) 2019-08-06 11:11:42,961 : DEBUG : main : : NodeContainer : Image Reader (Table) : 2:16 : Chunk Loop Start 2:15 has new state: CONFIGURED 2019-08-06 11:11:42,961 : DEBUG : main : : Node : Image Features : 2:5 : reset 2019-08-06 11:11:42,961 : DEBUG : main : : Node : Image Features : 2:5 : clean output ports. 2019-08-06 11:11:42,962 : DEBUG : main : : NodeContainer : Image Reader (Table) : 2:16 : Setting dirty flag on Image Features 2:5 2019-08-06 11:11:42,962 : DEBUG : main : : NodeContainer : Image Reader (Table) : 2:16 : Image Features 2:5 has new state: IDLE 2019-08-06 11:11:42,962 : DEBUG : main : : Node : Tile Loop Start : 2:4 : reset 2019-08-06 11:11:42,962 : DEBUG : main : : Node : Tile Loop Start : 2:4 : clean output ports. 2019-08-06 11:11:42,962 : DEBUG : main : : NodeContainer : Image Reader (Table) : 2:16 : Setting dirty flag on Tile Loop Start 2:4 2019-08-06 11:11:42,962 : DEBUG : main : : NodeContainer : Image Reader (Table) : 2:16 : Tile Loop Start 2:4 has new state: IDLE 2019-08-06 11:11:42,962 : DEBUG : main : : Node : Image Reader (Table) : 2:16 : reset 2019-08-06 11:11:42,962 : DEBUG : main : : Node : Image Reader (Table) : 2:16 : clean output ports. 2019-08-06 11:11:42,962 : DEBUG : main : : NodeContainer : Image Reader (Table) : 2:16 : Setting dirty flag on Image Reader (Table) 2:16 2019-08-06 11:11:42,962 : DEBUG : main : : NodeContainer : Image Reader (Table) : 2:16 : Image Reader (Table) 2:16 has new state: IDLE 2019-08-06 11:11:42,963 : DEBUG : main : : Node : Image Reader (Table) : 2:16 : Configure succeeded. (Image Reader (Table)) 2019-08-06 11:11:42,963 : DEBUG : main : : NodeContainer : Image Reader (Table) : 2:16 : Image Reader (Table) 2:16 has new state: CONFIGURED 2019-08-06 11:11:42,963 : DEBUG : main : : Node : Tile Loop Start : 2:4 : Configure succeeded. (Tile Loop Start) 2019-08-06 11:11:42,963 : DEBUG : main : : NodeContainer : Image Reader (Table) : 2:16 : Tile Loop Start 2:4 has new state: CONFIGURED 2019-08-06 11:11:42,963 : DEBUG : main : : Node : Image Features : 2:5 : Configure succeeded. (Image Features) 2019-08-06 11:11:42,963 : DEBUG : main : : NodeContainer : Image Reader (Table) : 2:16 : Image Features 2:5 has new state: CONFIGURED 2019-08-06 11:11:42,963 : WARN : main : : Node : Joiner : 2:6 : Please define at least one joining column pair. 2019-08-06 11:11:42,963 : DEBUG : main : : Node : Image Features : 2:5 : reset 2019-08-06 11:11:42,963 : DEBUG : main : : Node : Image Features : 2:5 : clean output ports. 2019-08-06 11:11:42,963 : DEBUG : main : : NodeContainer : Image Reader (Table) : 2:16 : Image Features 2:5 has new state: IDLE 2019-08-06 11:11:42,963 : DEBUG : main : : Node : Tile Loop Start : 2:4 : reset 2019-08-06 11:11:42,963 : DEBUG : main : : Node : Tile Loop Start : 2:4 : clean output ports. 2019-08-06 11:11:42,963 : DEBUG : main : : NodeContainer : Image Reader (Table) : 2:16 : Tile Loop Start 2:4 has new state: IDLE 2019-08-06 11:11:42,963 : DEBUG : main : : Node : Image Reader (Table) : 2:16 : reset 2019-08-06 11:11:42,963 : DEBUG : main : : Node : Image Reader (Table) : 2:16 : clean output ports. 2019-08-06 11:11:42,963 : DEBUG : main : : NodeContainer : Image Reader (Table) : 2:16 : Image Reader (Table) 2:16 has new state: IDLE 2019-08-06 11:11:42,964 : DEBUG : main : : Node : Image Reader (Table) : 2:16 : Configure succeeded. (Image Reader (Table)) 2019-08-06 11:11:42,964 : DEBUG : main : : NodeContainer : Image Reader (Table) : 2:16 : Image Reader (Table) 2:16 has new state: CONFIGURED 2019-08-06 11:11:42,964 : DEBUG : main : : Node : Tile Loop Start : 2:4 : Configure succeeded. (Tile Loop Start) 2019-08-06 11:11:42,964 : DEBUG : main : : NodeContainer : Image Reader (Table) : 2:16 : Tile Loop Start 2:4 has new state: CONFIGURED 2019-08-06 11:11:42,964 : DEBUG : main : : Node : Image Features : 2:5 : Configure succeeded. (Image Features) 2019-08-06 11:11:42,964 : DEBUG : main : : NodeContainer : Image Reader (Table) : 2:16 : Image Features 2:5 has new state: CONFIGURED 2019-08-06 11:11:42,964 : WARN : main : : Node : Joiner : 2:6 : Please define at least one joining column pair. 2019-08-06 11:11:44,019 : DEBUG : main : : Node : Image Features : 2:5 : reset 2019-08-06 11:11:44,019 : DEBUG : main : : Node : Image Features : 2:5 : clean output ports. 2019-08-06 11:11:44,020 : DEBUG : main : : NodeContainer : Image Reader (Table) : 2:16 : Image Features 2:5 has new state: IDLE 2019-08-06 11:11:44,020 : DEBUG : main : : Node : Tile Loop Start : 2:4 : reset 2019-08-06 11:11:44,020 : DEBUG : main : : Node : Tile Loop Start : 2:4 : clean output ports. 2019-08-06 11:11:44,020 : DEBUG : main : : NodeContainer : Image Reader (Table) : 2:16 : Tile Loop Start 2:4 has new state: IDLE 2019-08-06 11:11:44,020 : DEBUG : main : : Node : Image Reader (Table) : 2:16 : reset 2019-08-06 11:11:44,020 : DEBUG : main : : Node : Image Reader (Table) : 2:16 : clean output ports. 2019-08-06 11:11:44,020 : DEBUG : main : : NodeContainer : Image Reader (Table) : 2:16 : Image Reader (Table) 2:16 has new state: IDLE 2019-08-06 11:11:44,020 : DEBUG : main : : Node : Image Reader (Table) : 2:16 : Configure succeeded. (Image Reader (Table)) 2019-08-06 11:11:44,020 : DEBUG : main : : NodeContainer : Image Reader (Table) : 2:16 : Image Reader (Table) 2:16 has new state: CONFIGURED 2019-08-06 11:11:44,020 : DEBUG : main : : Node : Tile Loop Start : 2:4 : Configure succeeded. (Tile Loop Start) 2019-08-06 11:11:44,020 : DEBUG : main : : NodeContainer : Image Reader (Table) : 2:16 : Tile Loop Start 2:4 has new state: CONFIGURED 2019-08-06 11:11:44,021 : DEBUG : main : : Node : Image Features : 2:5 : Configure succeeded. (Image Features) 2019-08-06 11:11:44,021 : DEBUG : main : : NodeContainer : Image Reader (Table) : 2:16 : Image Features 2:5 has new state: CONFIGURED 2019-08-06 11:11:44,021 : WARN : main : : Node : Joiner : 2:6 : Please define at least one joining column pair. 2019-08-06 11:11:52,337 : DEBUG : main : : NodeContainer : Joiner : 2:6 : Setting dirty flag on Joiner 2:6 2019-08-06 11:11:52,339 : DEBUG : main : : Node : Joiner : 2:6 : Configure succeeded. (Joiner) 2019-08-06 11:11:52,339 : DEBUG : main : : NodeContainer : Joiner : 2:6 : Joiner 2:6 has new state: CONFIGURED 2019-08-06 11:11:52,339 : WARN : main : : Node : Row Filter : 2:7 : No row filter specified 2019-08-06 11:11:52,939 : DEBUG : main : : Node : Joiner : 2:6 : reset 2019-08-06 11:11:52,939 : DEBUG : main : : Node : Joiner : 2:6 : clean output ports. 2019-08-06 11:11:52,939 : DEBUG : main : : NodeContainer : Joiner : 2:6 : Joiner 2:6 has new state: IDLE 2019-08-06 11:11:52,940 : DEBUG : main : : Node : Joiner : 2:6 : Configure succeeded. (Joiner) 2019-08-06 11:11:52,940 : DEBUG : main : : NodeContainer : Joiner : 2:6 : Joiner 2:6 has new state: CONFIGURED 2019-08-06 11:11:52,940 : WARN : main : : Node : Row Filter : 2:7 : No row filter specified 2019-08-06 11:11:59,304 : DEBUG : KNIME-Worker-1 : : WorkflowManager : Chunk Loop Start : 2:15 : Chunk Loop Start 2:15 doBeforePreExecution 2019-08-06 11:11:59,305 : DEBUG : KNIME-Worker-1 : : NodeContainer : Chunk Loop Start : 2:15 : Chunk Loop Start 2:15 has new state: PREEXECUTE 2019-08-06 11:11:59,305 : DEBUG : KNIME-Worker-1 : : WorkflowManager : Chunk Loop Start : 2:15 : Chunk Loop Start 2:15 doBeforeExecution 2019-08-06 11:11:59,305 : DEBUG : KNIME-Worker-1 : : NodeContainer : Chunk Loop Start : 2:15 : Chunk Loop Start 2:15 has new state: EXECUTING 2019-08-06 11:11:59,307 : DEBUG : KNIME-Worker-1 : : WorkflowDataRepository : Chunk Loop Start : 2:15 : Adding handler 1a29f3d3-11aa-45ac-8702-953d59a952f3 (Chunk Loop Start 2:15: ) - 1 in total 2019-08-06 11:11:59,307 : DEBUG : KNIME-Worker-1 : : LocalNodeExecutionJob : Chunk Loop Start : 2:15 : Chunk Loop Start 2:15 Start execute 2019-08-06 11:11:59,345 : DEBUG : KNIME-Worker-1 : : BufferSettings : Chunk Loop Start : 2:15 : Using table format org.knime.core.data.container.DefaultTableStoreFormat 2019-08-06 11:11:59,349 : INFO : KNIME-Worker-1 : : LocalNodeExecutionJob : Chunk Loop Start : 2:15 : Chunk Loop Start 2:15 End execute (0 secs) 2019-08-06 11:11:59,349 : DEBUG : KNIME-Worker-1 : : WorkflowManager : Chunk Loop Start : 2:15 : Chunk Loop Start 2:15 doBeforePostExecution 2019-08-06 11:11:59,349 : DEBUG : KNIME-Worker-1 : : NodeContainer : Chunk Loop Start : 2:15 : Chunk Loop Start 2:15 has new state: POSTEXECUTE 2019-08-06 11:11:59,349 : DEBUG : KNIME-Worker-1 : : WorkflowManager : Chunk Loop Start : 2:15 : Chunk Loop Start 2:15 doAfterExecute - success 2019-08-06 11:11:59,350 : DEBUG : KNIME-Worker-1 : : NodeContainer : Chunk Loop Start : 2:15 : Chunk Loop Start 2:15 has new state: EXECUTED 2019-08-06 11:11:59,350 : DEBUG : KNIME-Worker-1 : : Node : Image Reader (Table) : 2:16 : Configure succeeded. (Image Reader (Table)) 2019-08-06 11:11:59,350 : DEBUG : KNIME-Worker-1 : : NodeContainer : Chunk Loop Start : 2:15 : Image Reader (Table) 2:16 has new state: CONFIGURED_QUEUED 2019-08-06 11:11:59,350 : DEBUG : KNIME-Worker-1 : : Node : Tile Loop Start : 2:4 : Configure succeeded. (Tile Loop Start) 2019-08-06 11:11:59,351 : DEBUG : KNIME-Worker-1 : : Node : Image Features : 2:5 : Configure succeeded. (Image Features) 2019-08-06 11:11:59,351 : DEBUG : KNIME-Worker-1 : : Node : Joiner : 2:6 : Configure succeeded. (Joiner) 2019-08-06 11:11:59,351 : WARN : KNIME-Worker-1 : : Node : Row Filter : 2:7 : No row filter specified 2019-08-06 11:11:59,351 : DEBUG : KNIME-Worker-4 : : WorkflowManager : Image Reader (Table) : 2:16 : Image Reader (Table) 2:16 doBeforePreExecution 2019-08-06 11:11:59,351 : DEBUG : KNIME-Worker-4 : : NodeContainer : Image Reader (Table) : 2:16 : Image Reader (Table) 2:16 has new state: PREEXECUTE 2019-08-06 11:11:59,351 : DEBUG : KNIME-Worker-4 : : WorkflowManager : Image Reader (Table) : 2:16 : Image Reader (Table) 2:16 doBeforeExecution 2019-08-06 11:11:59,351 : DEBUG : KNIME-Worker-4 : : NodeContainer : Image Reader (Table) : 2:16 : Image Reader (Table) 2:16 has new state: EXECUTING 2019-08-06 11:11:59,352 : DEBUG : KNIME-Worker-4 : : LocalNodeExecutionJob : Image Reader (Table) : 2:16 : Image Reader (Table) 2:16 Start execute 2019-08-06 11:12:01,636 : WARN : KNIME-Worker-4 : : ImgReaderTableNodeModel : Image Reader (Table) : 2:16 : Encountered exception while reading image: Row0! view log for more info. 2019-08-06 11:12:01,636 : DEBUG : KNIME-Worker-4 : : ImgReaderTableNodeModel : Image Reader (Table) : 2:16 : Encountered exception while reading image: java.lang.IllegalArgumentException: Array size too large: 39840 x 37639 x 3 x 1 at org.scijava.util.ArrayUtils.safeMultiply32(ArrayUtils.java:175) at org.scijava.util.ArrayUtils.allocate(ArrayUtils.java:148) at io.scif.ByteArrayPlane.blankPlane(ByteArrayPlane.java:81) at io.scif.ByteArrayPlane.blankPlane(ByteArrayPlane.java:47) at io.scif.AbstractPlane.populate(AbstractPlane.java:133) at io.scif.AbstractPlane.populate(AbstractPlane.java:122) at io.scif.AbstractPlane.(AbstractPlane.java:77) at io.scif.ByteArrayPlane.(ByteArrayPlane.java:58) at io.scif.ByteArrayReader.createPlane(ByteArrayReader.java:64) at io.scif.ByteArrayReader.createPlane(ByteArrayReader.java:43) at io.scif.filters.AbstractReaderFilter.createPlane(AbstractReaderFilter.java:406) at io.scif.filters.ChannelFiller.openPlane(ChannelFiller.java:145) at io.scif.filters.PlaneSeparator.openPlane(PlaneSeparator.java:303) at io.scif.filters.PlaneSeparator.openPlane(PlaneSeparator.java:209) at io.scif.filters.AbstractReaderFilter.openPlane(AbstractReaderFilter.java:225) at io.scif.filters.AbstractReaderFilter.openPlane(AbstractReaderFilter.java:193) at io.scif.img.ImgOpener.read(ImgOpener.java:691) at io.scif.img.ImgOpener.read(ImgOpener.java:675) at io.scif.img.ImgOpener.read(ImgOpener.java:656) at io.scif.img.ImgOpener.readPlanes(ImgOpener.java:643) at io.scif.img.ImgOpener.openImgs(ImgOpener.java:358) at io.scif.img.ImgOpener.openImgs(ImgOpener.java:769) at io.scif.img.ImgOpener.openImg(ImgOpener.java:884) at org.knime.knip.io.ScifioImgSource.getImg(ScifioImgSource.java:299) at org.knime.knip.io.nodes.imgreader2.AbstractReadImgFunction.readImageAndMetadata(AbstractReadImgFunction.java:138) at org.knime.knip.io.nodes.imgreader2.readfrominput.ReadImgTableFunction.lambda$0(ReadImgTableFunction.java:98) at java.util.stream.Streams$RangeIntSpliterator.forEachRemaining(Streams.java:110) at java.util.stream.IntPipeline$Head.forEachOrdered(IntPipeline.java:567) at org.knime.knip.io.nodes.imgreader2.readfrominput.ReadImgTableFunction.apply(ReadImgTableFunction.java:92) at org.knime.knip.io.nodes.imgreader2.readfrominput.ImgReaderTableNodeModel.execute(ImgReaderTableNodeModel.java:153) at org.knime.core.node.NodeModel.execute(NodeModel.java:733) at org.knime.core.node.NodeModel.executeModel(NodeModel.java:567) at org.knime.core.node.Node.invokeFullyNodeModelExecute(Node.java:1192) at org.knime.core.node.Node.execute(Node.java:979) at org.knime.core.node.workflow.NativeNodeContainer.performExecuteNode(NativeNodeContainer.java:559) at org.knime.core.node.exec.LocalNodeExecutionJob.mainExecute(LocalNodeExecutionJob.java:95) at org.knime.core.node.workflow.NodeExecutionJob.internalRun(NodeExecutionJob.java:179) at org.knime.core.node.workflow.NodeExecutionJob.run(NodeExecutionJob.java:110) at org.knime.core.util.ThreadUtils$RunnableWithContextImpl.runWithContext(ThreadUtils.java:328) at org.knime.core.util.ThreadUtils$RunnableWithContext.run(ThreadUtils.java:204) at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:511) at java.util.concurrent.FutureTask.run(FutureTask.java:266) at org.knime.core.util.ThreadPool$MyFuture.run(ThreadPool.java:123) at org.knime.core.util.ThreadPool$Worker.run(ThreadPool.java:246) 2019-08-06 11:12:01,637 : DEBUG : KNIME-Worker-4 : : BufferSettings : Image Reader (Table) : 2:16 : Using table format org.knime.core.data.container.DefaultTableStoreFormat 2019-08-06 11:12:01,648 : DEBUG : KNIME-Worker-4 : : Buffer : Image Reader (Table) : 2:16 : Buffer file (/tmp/knime_LiverWorkflow76650/knime_container_20190806_8635726457766448996.bin.snappy) is 0MB in size 2019-08-06 11:12:01,649 : WARN : KNIME-Worker-4 : : Node : Image Reader (Table) : 2:16 : Encountered errors during execution! 2019-08-06 11:12:01,649 : INFO : KNIME-Worker-4 : : LocalNodeExecutionJob : Image Reader (Table) : 2:16 : Image Reader (Table) 2:16 End execute (2 secs) 2019-08-06 11:12:01,649 : DEBUG : KNIME-Worker-4 : : WorkflowManager : Image Reader (Table) : 2:16 : Image Reader (Table) 2:16 doBeforePostExecution 2019-08-06 11:12:01,649 : DEBUG : KNIME-Worker-4 : : NodeContainer : Image Reader (Table) : 2:16 : Image Reader (Table) 2:16 has new state: POSTEXECUTE 2019-08-06 11:12:01,649 : DEBUG : KNIME-Worker-4 : : WorkflowManager : Image Reader (Table) : 2:16 : Image Reader (Table) 2:16 doAfterExecute - success 2019-08-06 11:12:01,649 : DEBUG : KNIME-Worker-4 : : NodeContainer : Image Reader (Table) : 2:16 : Image Reader (Table) 2:16 has new state: EXECUTED 2019-08-06 11:12:01,650 : DEBUG : KNIME-Worker-4 : : Node : Tile Loop Start : 2:4 : Configure succeeded. (Tile Loop Start) 2019-08-06 11:12:01,650 : DEBUG : KNIME-Worker-4 : : NodeContainer : Image Reader (Table) : 2:16 : LiverWorkflow 2 has new state: IDLE